3 Scouting and Management of Diseases 


    A large number of diseases affect both yield and quality of alfalfa. The primary diseases of alfalfa are fungal leafspots, crown rot, sclerotinia stem rot, phytophthora root rot, and anthracnose. Disease control in alfalfa depends heavily on use of resistant cultivars and recommended agronomic practices to establish a vigorously growing crop. Cutting or grazing rank growth will help lower the humidity in the foliage and reduce the moisture that encourages pathogen growth and infection. Areas that become heavily infested with soil-borne diseases may need to be taken out of alfalfa production for two or three years to allow the pathogens to die. When possible, rotate fields with com or sorghum to help prevent the buildup of these pests. It is not economical to spray fungicides for disease control in alfalfa.
 

Anthracnose

    Anthracnose (Colletotrichum trifolit) symptoms range from a few irregular, blackened areas on resistant stems to large, sunken, oval to diamond-shaped lesions on stems of susceptible plants (Figure 1). The lesions are straw colored with brown borders. Black fruiting structures (acervuli) develop in the bleached lesions and are readily visible with a hand lens. The lesions enlarge, grow together, girdle, and kill one or more stems on a plant. A conspicuous symptom of anthracnose is straw-colored to pearly white dead shoots scattered through the field in summer and fall.
    The crown rot phase of anthracnose is characterized by bluish black discoloration of invaded tissue. This symptom is often observed when killed stems are broken off at the crown. Sometimes lesions cannot be found on the dead stems. If the stem is broken off and the base is bluish black, the diagnosis is andiracnose. If the base has light brown discoloration, the disease could be fusarium wilt or rhizoctonia crown rot. These diseases may occur together in the same field. Other symptoms of andiracnose include blackening and killing of petioles and occasional formation of a "shepherds crook" when the stem dies suddenly while wilted.
 

Phytophthora Root Rot

    Plants infected with phytophthora root rot (Phytophthora megasperma) wilt, and the foliage, particularly the lower leaves, becomes yellow. Regrowth of diseased plants is often slow after cutting. Lesions with diffuse margins on the taproots are yellow to brown and usually start where a lateral root emerges. The yellow discoloration of tissue that extends through the root cortex into the xylem tissue is a diagnostic feature of the disease. Taproots of numerous surviving plants in the field may be rotted off at various depths., if conditions do not favor the pathogen, new roots will form.
 

Sclerotinia Crown and Stem Rot

    Leaves and stems infected with sclerotinia crown and stem rot (Sclerotinia trifoliorum) become yellow and limp, and finally collapse (Figure 2 and figure 3). White fluffy fungus growth covers dead plant parts on the soil surface and initiates new infections. When the fungus exhausts its food supply or when environmental conditions are unsuitable for its continued growth, the fungus produces hard black sclerotia about the size of pencil lead on or in stem and crown tissue. Sclerotia act as spores and can infect new plants in subsequent years. Although sclerotia can live for many years, they become less healthy and even die if there is no alfalfa to infect. As a consequence, rotation to non-host crops can be a very beneficial control technique. First year stands are usually hardest hit. Older stands are less susceptible to this problem. Greatest damage occurs during early spring. When conditions begin to warm up the disease usually becomes less severe.
 

Fungal Leafspots

    Leafspots interfere with photosynthesis and cause premature defoliation. The most serious leafspots in North Carolina are Lepto leafspot, spring leafspot and summer leafspot. Rust occurs during late summer and fan in the coastal plain and piedmont and can be severe if harvest is delayed. Rusts can be controlled by planting resistant cultivars, but cultivars resistant to other leaf spots are not available.
    Spring black stem and leafspot (Phoma medicaginis) may infect all above-ground parts of the plant, and the fungus may extend to the crown and upper root. In early spring numerous small black-to-dark-brown spots develop on the lower leaves, petioles, and stems. Young shoots are often girdled and killed. Irregularly shaped lesions on leaves increase in size, grow together, and become lighter brown; leaves turn yellow and often wither before falling. Lesions on stems and petioles enlarge and may girdle and blacken large areas near the base of the plant. The fungus also causes a crown and root rot. In humid areas, seedpods may discolor and shrivel.
    Summer black stem and leafspot (Cercospora medicaginis) produces small brown spots on both leaf surfaces. These enlarge to form roughly circular, but indefinite, reddish brown to smoky brown lesions 0.1 to 0.2 inch in diameter. When relative humidity is at or near 100 percent and environmental conditions favor spore production, the lesions become ashy gray with silvery, glistening areas where spores are formed. Heavy infections kill leaflets and cause severe defoliation. As the season progresses, elongated, dark brown stem lesions enlarge and coalesce until most of the stem is discolored. Small stems on nearly mature plants may die, resulting in further defoliation.
    Lepto leafspot (Leptosphaerulina briosiana) primarily affects young leaves but also attacks petioles and other above-ground parts (Figure 4). Leaf symptoms vary with plant age, stage of growth, and environment. Lesions often start as small black spots and either remain "pepper spots," as on white clover, or enlarge to form oval or round "eye spots" 0.1 inch in diameter. The lesions have light brown to tan centers and dark brown borders, often surrounded by a bleached-out area. When conditions favoring infection and disease development coincide with rapid regrowth, lesions appear as rather large, light tan to almost white areas that grow together to kill the entire leaf. High light intensity increases lesion size. The dead leaflets and petioles often remain attached to die stem for a time. In older growth, the young upper leaves become infected and show typical symptoms but seldom die before harvesting.
 

Crown Rot (Rhizoctonia)

    Although thizoctonia crown rot (Rhizoctonia solani and other fungi) can cause root and stem rots, the disease is usually noticed first as a crown rot. In bud rot and crown rot phases, brown lesions first appear on the buds and young shoots below and at ground level. As the infection progresses, buds and shoots die and the fungus grows into the crown, preventing further production of new vegetative buds in the affected tissue. Sunken whitish to brown lesions also develop near the base of a stem and may girdle and kill it. Often brown bands develop in the older, lighter lesions that indicate expansion of the infected areas. Coarse brown fungus growth may be evident on the surface of the lesions. Rhizoctonia stem lesions may be mistaken for anthracnose, but they do not have die black discoloration (setae) common to anthracnose.
    During long periods of hot, wet weather, particularly in humid areas, R. solani attacks leaves and stems, which collapse quickly to form water-soaked dead tissue. in a few days, if favorable weather conditions continue, the fungus spreads to adjacent plants. A characteristic symptom is dead leaves sticking to neighboring leaves and stems by the strands of the fungus. Sometimes large areas of dead plants appear as though killed by scalding water. While other fungi can and do cause crown rot, Rhizoctonia is the most common fungus associated with this symptom.
 

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